[Moose-dev] Re: Trying to display local ancestry inference with Grapher

Don’t you want to consider in moving to the last version of Roassal? Alexandre -- _,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;: Alexandre Bergel http://www.bergel.eu ^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;. On Nov 18, 2015, at 6:15 PM, Hernán Morales Durand < hernan.morales(a)gmail.com&gt; wrote: Hello, I am using Roassal2 (StephanEggermont.40) in Pharo 4. The attached picture displays a common visualization for inference of local ancestry in population genetics, I have attached what I am getting now with Grapher. Input data for such visualization is for example: 1:454 2:1488 1:2546 2:5711 1:14253 2:24411 1:31490 0:41585 (those are like Associations with key 0, 1 or 2 and value 454, 1488, ... etc) In the attached picture Min X is 0 and Max X is 41500 so the X axis (chromosome positions) is rendered in intervals between 10000. This is what I am trying now (code is commented where I tried to configure X axis interval) | b intv | intv := 0 to: 40000 by: 10000. b := RTGrapher new. ds := RTStackedDataSet new. ds dotShape color: Color red. ds points: #(1 2 1 2 1 2 1 0); x: intv. "????" ds barShape width: 99; color: Color red. "b minX: 0; maxX: 41500." b add: ds. b axisX noLabel; noTick. b axisY noDecimal. b build. I have some questions: 1) There is support to add an interval label to the X axis but preserving the space relation with the real chromosome position (the X axis) for the data (points in my example = 454 1488 2546 5711 14253 24411 31490 41585)? 2) How to clear the bar filling? Any advice or help would be really nice. Hernán <LocalAncestry.jpg><Grapher_Test1.png> _______________________________________________ Moose-dev mailing list Moose-dev(a)list.inf.unibe.ch https://www.list.inf.unibe.ch/listinfo/moose-dev _______________________________________________ Moose-dev mailing list Moose-dev(a)list.inf.unibe.ch https://www.list.inf.unibe.ch/listinfo/moose-dev